cowbird.handlers.impl.filesystem

Attributes

LOGGER
DEFAULT_NOTEBOOKS_DIR_NAME
DEFAULT_PUBLIC_WORKSPACE_WPS_OUTPUTS_SUBPATH
DEFAULT_WPS_OUTPUTS_RES_NAME
DEFAULT_SECURE_DATA_PROXY_NAME
DEFAULT_USER_WPS_OUTPUTS_DIR_NAME

Classes

FileSystem

Keep the proper directory structure in sync with the platform.

Module Contents

cowbird.handlers.impl.filesystem.LOGGER

cowbird.handlers.impl.filesystem.DEFAULT_NOTEBOOKS_DIR_NAME = 'notebooks'

cowbird.handlers.impl.filesystem.DEFAULT_PUBLIC_WORKSPACE_WPS_OUTPUTS_SUBPATH = 'public/wps_outputs'

cowbird.handlers.impl.filesystem.DEFAULT_WPS_OUTPUTS_RES_NAME = 'wps_outputs'

cowbird.handlers.impl.filesystem.DEFAULT_SECURE_DATA_PROXY_NAME = 'secure-data-proxy'

cowbird.handlers.impl.filesystem.DEFAULT_USER_WPS_OUTPUTS_DIR_NAME = 'wps_outputs'

class cowbird.handlers.impl.filesystem.FileSystem(settings: cowbird.typedefs.SettingsType, name: str, jupyterhub_user_data_dir: str, wps_outputs_dir: str, secure_data_proxy_name: str = DEFAULT_SECURE_DATA_PROXY_NAME, wps_outputs_res_name: str = DEFAULT_WPS_OUTPUTS_RES_NAME, notebooks_dir_name: str = DEFAULT_NOTEBOOKS_DIR_NAME, public_workspace_wps_outputs_subpath: str = DEFAULT_PUBLIC_WORKSPACE_WPS_OUTPUTS_SUBPATH, user_wps_outputs_dir_name: str = DEFAULT_USER_WPS_OUTPUTS_DIR_NAME, **kwargs: Any)

Bases: cowbird.handlers.handler.Handler, cowbird.monitoring.fsmonitor.FSMonitor

Keep the proper directory structure in sync with the platform.

Create the file system instance.

Parameters:

• settings – Cowbird settings for convenience

• name – Handler name

• jupyterhub_user_data_dir – Path to the JupyterHub user data directory, which will be symlinked to the working directory

• wps_outputs_dir – Path to the wps outputs directory

• secure_data_proxy_name – Name of the secure-data-proxy service found on Magpie

• wps_outputs_res_name – Name of the WPS outputs resource found on Magpie under the secure-data-proxy service

• notebooks_dir_name – Name of the symlink directory found in the user workspace and which directs to the user’s notebook directory

• public_workspace_wps_outputs_subpath – Subpath to the directory containing hardlinks to the public WPS outputs data

• user_wps_outputs_dir_name – Name of the directory found in the user workspace and which contains the hardlinks to the user WPS outputs data

required_params

jupyterhub_user_data_dir

secure_data_proxy_name

wps_outputs_res_name

wps_outputs_dir

notebooks_dir_name

public_workspace_wps_outputs_subpath

user_wps_outputs_dir_name

wps_outputs_user_data_regex

start_wps_outputs_monitoring(monitoring: cowbird.monitoring.monitoring.Monitoring) → None

get_user_workspace_dir(user_name: str) → str

get_user_workspace_wps_outputs_dir(user_name: str) → str

get_public_workspace_wps_outputs_dir() → str

_get_jupyterhub_user_data_dir(user_name: str) → str

static _create_symlink_dir(src: str, dst: str) → None

user_created(user_name: str) → None

user_deleted(user_name: str) → None

static get_instance() → FileSystem

Return the FileSystem singleton instance from the class name used to retrieve the FSMonitor from the DB.

_get_public_hardlink(src_path: str) → str

get_user_hardlink(src_path: str, bird_name: str, user_name: str, subpath: str) → str

_get_secure_data_proxy_file_perms(src_path: str, user_name: str) → Tuple[bool, bool]

Finds a route from the secure-data-proxy service that matches the resource path (or one of its parent resource) and gets the user permissions on that route.

update_secure_data_proxy_path_perms(src_path: str, user_name: str) → bool

Gets a path’s permissions from the secure-data-proxy service and updates the file system permissions accordingly.

Returns a boolean to indicate if the user should have some type of access to the path or not.

static create_hardlink_path(src_path: str, hardlink_path: str, access_allowed: bool) → None

Creates a hardlink path from a source file, if the user has access rights.

_create_wps_outputs_hardlink(src_path: str, overwrite: bool = False, process_user_files: bool = True, process_public_files: bool = True) → None

on_created(path: str) → None

Call when a new path is found.

Parameters:

path – Absolute path of a new file/directory

on_modified(path: str) → None

Called when a path is updated.

Parameters:

path – Absolute path of a new file/directory

_delete_wps_outputs_hardlink(src_path: str, process_user_paths: bool = True, process_public_paths: bool = True) → bool

Deletes the hardlink path that corresponds to the input source path.

Returns a bool to indicate if a hardlink path was deleted or not.

on_deleted(path: str) → None

Called when a path is deleted.

Parameters:

path – Absolute path of a new file/directory

_check_if_res_from_secure_data_proxy(res_tree: List[cowbird.typedefs.JSON]) → bool

Checks if the resource is part of a secure-data-proxy service of type API.

_update_permissions_on_filesystem(permission: cowbird.permissions_synchronizer.Permission) → None

permission_created(permission: cowbird.permissions_synchronizer.Permission) → None

permission_deleted(permission: cowbird.permissions_synchronizer.Permission) → None

resync() → None

Resync operation, regenerating required links (user_workspace, wps_outputs, …)